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View Structure Prediction Details

Protein: GDL87_ARATH
Organism: Arabidopsis thaliana
Length: 376 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GDL87_ARATH.

Description E-value Query
Range
Subject
Range
GDL75_ARATH - GDSL esterase/lipase At5g08460 OS=Arabidopsis thaliana GN=At5g08460 PE=2 SV=1
305.0 [0..1] [373..12]

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Predicted Domain #1
Region A:
Residues: [1-376]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTNNTPFLT IFLLFLGLLR FDSFPGLEAA TGKLASIPGL YVFGDSLVDA GNNNYLPISI  60
   61 SKANYPHNGV DFPNKKPTGR FCNGKNAADA IAEKFGLPLP PPYLSLRGLL KREKRKSAAV 120
  121 TGVNFASGGA GIFNSSDQKL GQAIPLSKQV NNWLSIHEEV MKLEPSAAQL HLSKSLFTVV 180
  181 IGSNDLFDYF GSFKLRRQSN PQQYTQLMAD KLKEQLKRIH DSGARRFLII GVAQIGCTPG 240
  241 KRAKNSTLHE CDEGANMWCS LYNEALVKML QQLKQELQGS ITYTYFDNYK SLHDIISNPA 300
  301 RYGFADVTSA CCGNGELNAD LPCLPLAKLC SDRTKHLFWD RYGHPTEAAA RTIVDLMLTD 360
  361 DTHYSSPITL TQLVST

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.98
Match: 1escA
Description: THE MOLECULAR MECHANISM OF ENANTIORECOGNITION BY ESTERASES
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.471286748048633 bayes_pls_golite062009
catalytic activity 0.319044203629006 bayes_pls_golite062009
protein binding 0.0277911089352154 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle