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View Structure Prediction Details

Protein: CSLA3_ARATH
Organism: Arabidopsis thaliana
Length: 556 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CSLA3_ARATH.

Description E-value Query
Range
Subject
Range
CSLA9_ARATH - Glucomannan 4-beta-mannosyltransferase 9 OS=Arabidopsis thaliana GN=CSLA9 PE=2 SV=1
269.0 [0..43] [554..21]

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Predicted Domain #1
Region A:
Residues: [1-371]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPFLKFFLF LYDYLSPSSF FLVQRNTLGA SLDTTDGVVR SGIIGEIIYI WKQTRIFVFI  60
   61 PILKCLVTIC LVMSLLLFIE RVYMSIVVVF VKLLRRTPEK VHKWEPINDD DLELANTNYP 120
  121 MVLIQIPMYN EKEVCQLSIG AACRLSWPLD RMIVQVLDDS TDPASKELVN AECDKWARKG 180
  181 INIMSEIRDN RIGYKAGALK AGMMHNYVKQ CEFVAIFDAD FQPDPDFLER TIPFLIHNHE 240
  241 ISLVQCRWKF VNANECLMTR MQEMSLNYHF VAEQESGSSI HAFFGFNGTA GVWRIAALNE 300
  301 AGGWKDRTTV EDMDLAVRAC LHGWKFVYVH DVEVKNELPS TFKAYRFQQH RWSCGPANLW 360
  361 RKMTMEILQN K

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.69897
Match: 2d7iA
Description: No description for 2d7iA was found.

Predicted Domain #2
Region A:
Residues: [372-556]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KVSAWKKLYL IYNFFFIRKI VVHIFTFVFY CLILPTTVLF PELQVPKWAT VYFPTTITIL  60
   61 NAIATPRSLH LLVFWILFEN VMSMHRTKAT FIGLLEAGRV NEWVVTEKLG DTLKSKLIGK 120
  121 ATTKLYTRFG QRLNWRELVV GLYIFFCGCY DFAYGGSYFY VYLFLQSCAF FVAGVGYIGT 180
  181 FVPTV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle