| Protein: | gi|11288806, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 159 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|11288806, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
135.0 | [0..79] | [159..65] |
|
Region A: Residues: [1-74] |
1 11 21 31 41 51
| | | | | |
1 MASRPLISLQ LLSSSSSSSS LKPTTKLLFF HKPELISHHH RNRNKLSRTS VHQHSANLII 60
61 HPSVLFLSSA FDGG
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.331 | a.36.1 | Signal peptide-binding domain |
| View | Download | 0.289 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.263 | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.223 | a.4.1 | Homeodomain-like |
| View | Download | 0.216 | a.65.1 | Annexin |
|
Region A: Residues: [75-159] |
1 11 21 31 41 51
| | | | | |
1 GGFIDTQTFI VTISLVVAIA LSLFLGFKGD PVPCERCGGN GGTKCVFCLE GKMKVESGMV 60
61 DCKVCKGSGL IFCKKCGGSG YSRRL
|
| Detection Method: | |
| Confidence: | 3.09 |
| Match: | 2cttA |
| Description: | Solution structure of zinc finger domain from human DnaJ subfamily A menber 3 |
Matching Structure (courtesy of the PDB): |
|
