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View Structure Prediction Details

Protein: AXS2_ARATH
Organism: Arabidopsis thaliana
Length: 389 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AXS2_ARATH.

Description E-value Query
Range
Subject
Range
gi|41205692 - gi|41205692|gb|AAR99612.1| dTDP-glucose 4,6-dehydratase [Geobacillus stearothermophilus]
277.0 [0..18] [385..3]

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Predicted Domain #1
Region A:
Residues: [1-389]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANGADRLDL DGKPIKPMTI CMIGAGGFIG SHLCEKLMTE TPHKVLALDV YNDKIKHLLE  60
   61 PDTVQWAGRI QFHRINIKHD SRLEGLIKMA DLTINLAAIC TPADYNTRPL DTIYSNFIDA 120
  121 LPVVKYCSEN NKRLIHFSTC EVYGKTIGSF LPKDHPLRQD PEFYVLKEDI SPCIFGSIEK 180
  181 QRWSYACAKQ LIERLVYAEG AENGLEFTIV RPFNWIGPRM DFIPGIDGPS EGVPRVLACF 240
  241 SNNLLRREPL KLVDGGESQR TFIYIKDAIE AVLLMIENPE RANGHIFNVG NPNNEVTVRQ 300
  301 LAEMMTEVYA KVSGETAIES PTIDVSSKEF YGEGYDDSDK RIPDMTIINR QLGWNPKTSL 360
  361 WDLLESTLTY QHTTYAEAIK KATSKPVAS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 49.0
Match: 2bllA
Description: Apo-structure of the C-terminal decarboxylase domain of ArnA
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle