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View Structure Prediction Details

Protein: gi|9758038, gi|2...
Organism: Arabidopsis thaliana
Length: 262 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|9758038, gi|2....

Description E-value Query
Range
Subject
Range
gi|20465418 - gi|20465418|gb|AAM20133.1| unknown protein [Arabidopsis thaliana]
302.0 [0..1] [262..1]

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Predicted Domain #1
Region A:
Residues: [1-75]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALSSLISAT PLSLSVPRYL VLPTRRRFHL PLATLDSSPP ESSASSSIPT SIPVNGNTLP  60
   61 SSYGTRKDDS PFAQF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [76-262]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FRSTESNVER IIFDFRFLAL LAVGGSLAGS LLCFLNGCVY IVEAYKVYWT NCSKGIHTGQ  60
   61 MVLRLVEAID VYLAGTVMLI FSMGLYGLFI SHSPHDVPPE SDRALRSSSL FGMFAMKERP 120
  121 KWMKISSLDE LKTKVGHVIV MILLVKMFER SKMVTIATGL DLLSYSVCIF LSSASLYILH 180
  181 NLHKGET

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 67.327902
Match: PF03350.7
Description: No description for PF03350.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle