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View Structure Prediction Details

Protein: GDL58_ARATH
Organism: Arabidopsis thaliana
Length: 374 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GDL58_ARATH.

Description E-value Query
Range
Subject
Range
GDL38_ARATH - GDSL esterase/lipase At2g23540 OS=Arabidopsis thaliana GN=At2g23540 PE=2 SV=1
332.0 [0..7] [374..14]

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Predicted Domain #1
Region A:
Residues: [1-374]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKSIFFVPV LVLFFFGSRF SRVASAGDQR ALAASFVFGD SLVDAGNNNY LQTLSRANSP  60
   61 PNGIDFKPSR GNPTGRFTNG RTIADIVGEK LGQQSYAVPY LAPNASGEAL LNGVNYASGG 120
  121 GGILNATGSV FVNRLGMDIQ VDYFTNTRKQ FDKLLGQDKA RDYIRKRSLF SVVIGSNDFL 180
  181 NNYLVPFVAA QARLTQTPET FVDDMISHLR NQLKRLYDMD ARKFVVGNVA PIGCIPYQKS 240
  241 INQLNDKQCV DLANKLAIQY NARLKDLLTV ELKDSLKDAH FVYANVYDLF MDLIVNFKDY 300
  301 GFRTASEACC ETRGRLAGIL PCGPTSSLCT DRSKHVFWDA YHPTEAANLL IADKLLYGDS 360
  361 KFVTPFNLLH LRDL

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.27
Match: 1escA
Description: THE MOLECULAR MECHANISM OF ENANTIORECOGNITION BY ESTERASES
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.471286748048633 bayes_pls_golite062009
catalytic activity 0.319044203629006 bayes_pls_golite062009
protein binding 0.0277911089352154 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle