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View Structure Prediction Details

Protein: Y5158_ARATH
Organism: Arabidopsis thaliana
Length: 493 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y5158_ARATH.

Description E-value Query
Range
Subject
Range
Y3130_ARATH - Receptor-like serine/threonine-protein kinase At3g01300 OS=Arabidopsis thaliana GN=At3g01300 PE=2 SV...
371.0 [0..1] [493..1]

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Predicted Domain #1
Region A:
Residues: [1-83]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLDAVKAKG NWKSEKPKET ENKNHKKKNG DDNKSRNEEE EEGEASGCWV KFRFMIGCIP  60
   61 SKSDLDASSS SIYGSNCTVT TME

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [84-493]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SKSANEKSND QPVGQVSSTT TTSNAESSSS TPVISEELNI SSHLRKFTFN DLKLSTRNFR  60
   61 PESLLGEGGF GCVFKGWIEE NGTAPVKPGT GLTVAVKTLN PDGLQGHKEW LAEINFLGNL 120
  121 LHPNLVKLVG YCIEDDQRLL VYEFMPRGSL ENHLFRRSLP LPWSIRMKIA LGAAKGLSFL 180
  181 HEEALKPVIY RDFKTSNILL DADYNAKLSD FGLAKDAPDE GKTHVSTRVM GTYGYAAPEY 240
  241 VMTGHLTSKS DVYSFGVVLL EMLTGRRSMD KNRPNGEHNL VEWARPHLLD KRRFYRLLDP 300
  301 RLEGHFSIKG AQKVTQLAAQ CLSRDPKIRP KMSDVVEALK PLPHLKDMAS SSYYFQTMQA 360
  361 ERLKNGSGRS QGFGSRNGQH QPVFRTLSSP HGSSPYRHQI PSPKPKGATT 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 68.09691
Match: 2qkwB
Description: No description for 2qkwB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle