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View Structure Prediction Details

Protein: SSL7_ARATH
Organism: Arabidopsis thaliana
Length: 371 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SSL7_ARATH.

Description E-value Query
Range
Subject
Range
gi|115443476, gi... - gi|115443476|ref|XP_001218545.1| hypothetical protein ATEG_09923 [Aspergillus terreus NIH2624], gi|1...
290.0 [0..14] [368..678]

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Predicted Domain #1
Region A:
Residues: [1-371]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVLFSSRSL ILSIIVPLLI SIALYKLDTF DPAIVPSDAF TSSATSLPPL INDEFLTGAE  60
   61 FIGVGLLNIP EDIAYHKESN LIYTGCVDGW VKRVKVADSV NDSVVEDWVN TGGRPLGIAF 120
  121 GIHGEVIVAD VHKGLLNISG DGKKTELLTD EADGVKFKLT DAVTVADNGV LYFTDASYKY 180
  181 TLNQLSLDML EGKPFGRLLS FDPTTRVTKV LLKDLYFANG ITISPDQTHL IFCETPMKRC 240
  241 SKYYISEERV EVFTQSLPGY PDNIRYDGDG HYWIALPSGV TTLWNISLKY PFLRKLTAMV 300
  301 AKYGVDLMFM ENAGVLQVDL DGNPIAYYHD PKLSHIATCD KIGKYLYCGS LSQSHILRLD 360
  361 LLKYPAQNKK L

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Detection Method: PSI-BLAST
Confidence: 48.69897
Match: 1vyhC
Description: PAF-AH Holoenzyme: Lis1/Alfa2
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle