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View Structure Prediction Details

Protein: GPDA1_ARATH
Organism: Arabidopsis thaliana
Length: 400 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GPDA1_ARATH.

Description E-value Query
Range
Subject
Range
gi|99031625, gi|... - gi|99031625|pdb|1X0V|B Chain B, Crystal Structure Of Homo Sapien Glycerol-3-Phosphate Dehydrogenase ...
260.0 [0..55] [399..9]

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Predicted Domain #1
Region A:
Residues: [1-400]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFRSFFFSS SIFSLSHSRS PSLSSSRFSS LSAAMSPALE KSRQGNGGCN DDSKSKVTVV  60
   61 GSGNWGSVAA KLIASNALKL PSFHDEVRMW VFEEVLPNGE KLNDVINKTN ENVKYLPGIK 120
  121 LGRNVVADPD LENAVKDANM LVFVTPHQFM DGICKKLDGK ITGDVEAISL VKGMEVKKEG 180
  181 PCMISSLISK QLGINCCVLM GANIANEIAV EKFSEATVGY RGSREIADTW VQLFSTPYFM 240
  241 VTPVHDVEGV ELCGTLKNVV AIAAGFVDGL EMGNNTKAAI MRIGLREMKA LSKLLFPSVK 300
  301 DSTFFESCGV ADVITTCLGG RNRRVAEAFA KSRGKRSFDE LEAEMLQGQK LQGVSTAREV 360
  361 YEVLKHCGWL EMFPLFSTVH QICTGRLQPE AIVQYRENKL 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 69.045757
Match: 1x0vA
Description: No description for 1x0vA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle