YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|18655385, gi|...
Organism: Arabidopsis thaliana
Length: 158 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18655385, gi|....

Description E-value Query
Range
Subject
Range
gi|109069682 - gi|109069682|ref|XP_001092691.1| PREDICTED: hypothetical protein [Macaca mulatta]
169.0 [0..1] [157..137]

Back

Predicted Domain #1
Region A:
Residues: [1-158]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMLKRTISI VRIGRGLSYR SLSSGNHVDK LGMVKALEAI NVPSTQAEAL TGAITSGFES  60
   61 VMGKVKADIA KSEEYKSTRV AEEFRKMRAD IEKMRADIAT IQAEERCDHD NHIHKVEQGF 120
  121 NELKDEFDAT KYKIVKYAIY TLIPVAAAET GMLFSMIY

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.05
Match: 1deqA
Description: Fibrinogen
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle