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View Structure Prediction Details

Protein: MRS21_ARATH
Organism: Arabidopsis thaliana
Length: 442 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MRS21_ARATH.

Description E-value Query
Range
Subject
Range
MRS2A_ARATH - Magnesium transporter MRS2-10 OS=Arabidopsis thaliana GN=MRS2-10 PE=2 SV=1
324.0 [0..1] [442..1]

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Predicted Domain #1
Region A:
Residues: [1-123]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSELKERLLP PRPASAMNLR DASVTRPSAS GRPPLLGVDV LGLKKRGQGL RSWIRVDTSG  60
   61 NTQVMEVDKF TMMRRCDLPA RDLRLLDPLF VYPSTILGRE KAIVVNLEQI RCIITADEVL 120
  121 LLN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [124-442]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SLDNYVLRYV VELQQRLKTS SVGEMWQQEN SQLSRRRSRS FDNAFENSSP DYLPFEFRAL  60
   61 EIALEAACTF LDSQASELEI EAYPLLDELT SKISTLNLER VRRLKSRLVA LTRRVQKVRD 120
  121 EIEQLMDDDG DMAEMYLTEK KRRMEGSMYG DQSLLGYRSN DGLSVSAPVS PVSSPPDSRR 180
  181 LDKSLSIARS RHDSARSSEG AENIEELEML LEAYFVVIDS TLNKLTSLKE YIDDTEDFIN 240
  241 IQLDNVRNQL IQFELLLTTA TFVVAIFGVV AGIFGMNFEI DFFNQPGAFR WVLIITGVCG 300
  301 FVIFSAFVWF FKYRRLMPL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 52.154902
Match: 2bbjA
Description: Crystal structure of the CorA Mg2+ transporter
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle