| Protein: | gi|12324976, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 647 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|12324976, gi|....
| Description | E-value | Query Range |
Subject Range |
|
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577.0 | [0..3] | [644..5] |
|
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532.0 | [0..2] | [647..5] |
|
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193.0 | [0..355] | [639..13] |
|
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193.0 | [0..305] | [641..6] |
|
Region A: Residues: [1-203] |
1 11 21 31 41 51
| | | | | |
1 MGKGWFMVEK ARRCLRTVFF MVAMLVSLLV SSLPVLVAIG DVLVPTFLLS SFTCLTCYGF 60
61 KEHLSRYAFK SSLTDIPLVS LVRSFLVICV YSLSDAPALS HGPYLGTVSL CSVVSVVLLS 120
121 VKACVFTANS QLNDQASSSP SRQRLHLKKS WGMPVLFLSS VVFALGHMVV AYRTSCRARR 180
181 KLLYHRVDPE AVLSCKSVFS GYQ
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [204-298] |
1 11 21 31 41 51
| | | | | |
1 KVPRSPIPLV GKASKVDGEA RRKLHPSVSN DDGELPARLL ADLDSLFITV RGLTVHYKIC 60
61 TPASPRHSIS SSVEANSMLN MPEAMVGRLK LDRNI
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.474 | d.82.2 | Frataxin-like |
| View | Download | 0.474 | d.82.2 | Frataxin-like |
| View | Download | 0.456 | d.237.1 | Hypothetical protein YjiA, C-terminal domain |
| View | Download | 0.456 | d.237.1 | Hypothetical protein YjiA, C-terminal domain |
| View | Download | 0.439 | d.50.1 | dsRNA-binding domain-like |
| View | Download | 0.432 | d.82.4 | Description not found. |
| View | Download | 0.420 | d.66.1 | Alpha-L RNA-binding motif |
| View | Download | 0.420 | d.66.1 | Alpha-L RNA-binding motif |
| View | Download | 0.411 | d.50.1 | dsRNA-binding domain-like |
| View | Download | 0.377 | d.17.6 | Archaeosine tRNA-guanine transglycosylase, C2 domain |
| View | Download | 0.263 | c.47.1 | Thioredoxin-like |
| View | Download | 0.230 | c.47.1 | Thioredoxin-like |
|
Region A: Residues: [299-647] |
1 11 21 31 41 51
| | | | | |
1 LSMVTRNKLN HHHHRSYSSL FNNSSSLHDP LLDGLPTSPR LFKDIQEESC REDGINVSNF 60
61 GATEQQDVGG NGQFGVVLVH GFGGGVFSWR HVMSSLAHQL GCVVTAFDRP GWGLTARPHK 120
121 KDLEEREMPN PYTLDNQVDM LLAFCHEMGF ASVVLVGHDD GGLLALKAAQ RLLETKDPIK 180
181 VKGVVLLNVS LTREVVPAFA RILLHTSLGK KHLVRPLLRT EIAQVVNRRA WYDPAKMTTD 240
241 VLRLYKAPLH VEGWDEALHE IGRLSSEMVL PTQNALSLLK AVENLPVLVV AGAEDALVPL 300
301 KSSQVMASKL ENSRLVAISG CGHLPHEECP KALLAAMCPF ISRLVFSED
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| Detection Method: | |
| Confidence: | 45.0 |
| Match: | 1cqzA |
| Description: | Epoxide hydrolase, N-terminal domain; Mammalian epoxide hydrolase, C-terminal domain |
Matching Structure (courtesy of the PDB): |
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