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View Structure Prediction Details

Protein: gi|9755647, gi|2...
Organism: Arabidopsis thaliana
Length: 268 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|9755647, gi|2....

Description E-value Query
Range
Subject
Range
gi|74180061 - gi|74180061|dbj|BAE36563.1| unnamed protein product [Mus musculus]
190.0 [0..4] [268..342]

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Predicted Domain #1
Region A:
Residues: [1-63]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEMVTSFVYP PPPSILLNCM SVVGVAALAN IGWSEIRGNH LKYSKFGVSS SSPQPQKERF  60
   61 GSI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [64-268]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSRNGMLLLY TPAFLAAASS FFVVPSDDLR FLLLKSALAL HFFKRVFEVL FIHKYSGGMA  60
   61 IDSALTISSS YFSSTALMLY SQNLTLGLTE PSFDMKLAGV VMFVVGIVGN LYHHVLLAKL 120
  121 RKEDGKKEYK IPKGGLFDII ICPHYLFEIL VFWSFFLISQ TIYSFSFAMG TMLYLIGRSY 180
  181 ATRTWYLSKF DDFPKHIKAL IPFVF

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 15.744727
Match: PF02544.7
Description: No description for PF02544.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle