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View Structure Prediction Details

Protein: PAP1_ARATH
Organism: Arabidopsis thaliana
Length: 318 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PAP1_ARATH.

Description E-value Query
Range
Subject
Range
PAP2_BRACM - Plastid lipid-associated protein 2, chloroplastic OS=Brassica campestris GN=PAP2 PE=1 SV=1
gi|14248556|gb|A... - plastid-lipid associated protein PAP2 [Brassica rapa]
328.0 [0..1] [318..1]

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Predicted Domain #1
Region A:
Residues: [1-163]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATVPLFTQF PCKTLNPSSS NTKHQSKSPI LLPINSINRR SEIGVSVHRP DFKIRATDID  60
   61 DEWGQDGVER VFASSSTVSV ADKAIESVEE TERLKRSLAD SLYGTDRGLS VSSDTRAEIS 120
  121 ELITQLESKN PTPAPNEALF LLNGKWILAY TSFVGLFPLL SRR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [164-318]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IEPLVKVDEI SQTIDSDSFT VQNSVRFAGP FSTTSFSTNA KFEIRSPKRV QIKFEQGVIG  60
   61 TPQLTDSIEI PESVEVLGQK IDLNPIKGLL TSVQDTASSV ARTISNQPPL KFSLPSDNTQ 120
  121 SWLLTTYLDK DLRISRGDGG SVYVLIKEGS SLLNP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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