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View Structure Prediction Details

Protein: SSL8_ARATH
Organism: Arabidopsis thaliana
Length: 376 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SSL8_ARATH.

Description E-value Query
Range
Subject
Range
gi|13877837 - gi|13877837|gb|AAK43996.1|AF370181_1 unknown protein [Arabidopsis thaliana]
254.0 [0..1] [376..1]

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Predicted Domain #1
Region A:
Residues: [1-376]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPISRRVLTP ITAAPVILAV LCFFFWSSII GPDNLKGTKH VLQDAKTIPL PVDGPESLEF  60
   61 DPQGEGPYVG VTDGRILKWR GEELGWVDFA YTSPHRDNCS SHEVVPSCGR PLGLSFERKT 120
  121 GDLYICDGYF GVMKVGPEGG LAELVVDEAE GRKVMFANQG DIDEEEDIFY FNDSSDTYHF 180
  181 RDVFYVSLSG TKVGRVIRYD MKKKEAKVIM DKLRLPNGLA LSKNGSFVVT CESSTNICHR 240
  241 IWVKGPKSGT NEVFATLPGS PDNIRRTPTG DFWVALHCKK NLFTRAVLIH TWVGRFFMNT 300
  301 MKMETVIHFM NGGKPHGIVV KLSGETGEIL EILEDSEGKT VKYVSEAYET KDGKLWIGSV 360
  361 YWPAVWVLDT SVYDSI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 34.154902
Match: 2fpbA
Description: No description for 2fpbA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle