| Protein: | PME41_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 573 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PME41_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
533.0 | [0..1] | [571..25] |
|
Region A: Residues: [1-205] |
1 11 21 31 41 51
| | | | | |
1 MLSLKLFLVT LFLSLQTLFI ASQTLLPSNS SSTICKTTPD PKFCKSVFPQ TSQGDVREYG 60
61 RFSLRKSLTQ SRKFTRTIDR YLKRNNALLS QSAVGALQDC RYLASLTTDY LITSFETVNI 120
121 TTSSKTLSFS KADEIQTLLS AALTNEQTCL DGINTAASSS WTIRNGVALP LINDTKLFSV 180
181 SLALFTKGWV PKKKKQVASY SWAHP
|
| Detection Method: |  |
| Confidence: | 18.30103 |
| Match: | 1xg2B |
| Description: | Crystal structure of the complex between pectin methylesterase and its inhibitor protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [206-573] |
1 11 21 31 41 51
| | | | | |
1 KNTHSHTKPF RHFRNGALPL KMTEHTRAVY ESLSRRKLAD DDNDVNTVLV SDIVTVNQNG 60
61 TGNFTTITEA VNSAPNKTDG TAGYFVIYVT SGVYEENVVI AKNKRYLMMI GDGINRTVVT 120
121 GNRNVVDGWT TFNSATFAVT SPNFVAVNMT FRNTAGPEKH QAVAMRSSAD LSIFYSCSFE 180
181 AYQDTLYTHS LRQFYRECDI YGTVDFIFGN AAVVFQDCNL YPRQPMQNQF NAITAQGRTD 240
241 PNQNTGISIH NCTIKPADDL VSSNYTVKTY LGRPWKEYSR TVFMQSYIDE VVEPVGWREW 300
301 NGDFALSTLY YAEYNNTGSG SSTTDRVVWP GYHVINSTDA NNFTVENFLL GDGWMVQSGV 360
361 PYISGLLS
|
| Detection Method: | |
| Confidence: | 100.0 |
| Match: | 1gq8A |
| Description: | Pectin methylesterase PemA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.142826098671881 | bayes_pls_golite062009 |
