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View Structure Prediction Details

Protein: INVA4_ARATH
Organism: Arabidopsis thaliana
Length: 664 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for INVA4_ARATH.

Description E-value Query
Range
Subject
Range
gi|2129544, gi|1... - pir||S71276 beta-fructofuranosidase (EC 3.2.1.26) 4, vacuolar - Arabidopsis thaliana (fragment), gi|...
693.0 [0..5] [664..1]

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Predicted Domain #1
Region A:
Residues: [1-112]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSDALLPI SAREEEPLCP YTRLPMADPN QETHGPRRRR PFKGLLAVSF GLLFIAFYVA  60
   61 LIATHDGSRS NDEGIDETET ITSRARLAGV SEKRNDGLWK LSGDRNTPAF EW

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [113-664]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NNSMLSWQRT AFHFQPEQNW MNDPNGPLFY KGWYHFFYQY NPNAAVWGDI VWGHAVSRDL  60
   61 IHWVHLPIAM VADQWYDSNG VWTGSATFLP DGSIVMLYTG STDKAVQVQN LAYPEDPNDP 120
  121 LLLKWVKFPG NPVLVPPPGI LPKDFRDPTT AWKTSEGKWR ITIGSKLNKT GISLVYDTID 180
  181 FKTYEKLDTL LHRVPNTGMW ECVDFYPVSK TAGNGLDTSV NGPDVKHIVK ASMDDTRFDH 240
  241 YAVGTYFDSN GTWIPDDPTI DVGMTASLRY DYGKFYASKS FYDQNKGRRV LWSWIGESDS 300
  301 EASDVQKGWS SLQGIPRTVV LDTKTGKNLV QWPVEEIKSL RLSSKQFDLE VGPGSVVPVD 360
  361 VGSAAQLDIE AEFEINKESL DKIIGNASVV AEAEEFSCEK SGGSTVRGAL GPFGFSVLAT 420
  421 ESLSEQTPVY FYVAKGKDSE LKTFFCTDTS RSSVANDVVK PIYGSVVPVL KGEKLTMRIL 480
  481 VDHSIVEAFG QGGRTCITSR VYPTTAIYGA AKLFLFNNAL DATVTASFTV WQMNSAFIHP 540
  541 YSDEAVRALS RT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 149.0
Match: 2ac1A
Description: No description for 2ac1A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle