| Protein: | EF112_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 218 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EF112_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
194.0 | [0..23] | [218..1] |
|
|
186.0 | [0..23] | [205..1] |
|
|
179.0 | [0..23] | [205..1] |
|
|
179.0 | [0..23] | [205..1] |
|
|
179.0 | [0..23] | [205..1] |
|
Region A: Residues: [1-138] |
1 11 21 31 41 51
| | | | | |
1 MHSGKRPLSP ESMAGNREEK KELCCCSTLS ESDVSDFVSE LTGQPIPSSI DDQSSSLTLQ 60
61 EKSNSRQRNY RGVRQRPWGK WAAEIRDPNK AARVWLGTFD TAEEAALAYD KAAFEFRGHK 120
121 AKLNFPEHIR VNPTQLYP
|
| Detection Method: |  |
| Confidence: | 24.0 |
| Match: | 2gccA |
| Description: | SOLUTION STRUCTURE OF THE GCC-BOX BINDING DOMAIN, NMR, MINIMIZED MEAN STRUCTURE |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [139-218] |
1 11 21 31 41 51
| | | | | |
1 SPATSHDRII VTPPSPPPPI APDILLDQYG HFQSRSSDSS ANLSMNMLSS SSSSLNHQGL 60
61 RPNLEDGENV KNISIHKRRK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.504 | d.68.3 | SirA-like |
| View | Download | 0.504 | d.68.3 | SirA-like |
| View | Download | 0.475 | a.138.1 | Multiheme cytochromes |
| View | Download | 0.434 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.416 | c.55.4 | Translational machinery components |
| View | Download | 0.397 | a.74.1 | Cyclin-like |
| View | Download | 0.397 | a.74.1 | Cyclin-like |
| View | Download | 0.396 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.384 | d.68.6 | DNA-binding protein Sso10b (AlbA) |
| View | Download | 0.372 | d.58.58 | Description not found. |
| View | Download | 0.234 | d.68.8 | Description not found. |
| View | Download | 0.213 | a.16.1 | S15/NS1 RNA-binding domain |
