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View Structure Prediction Details

Protein: FLA15_ARATH
Organism: Arabidopsis thaliana
Length: 436 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FLA15_ARATH.

Description E-value Query
Range
Subject
Range
FLA16_ARATH - Fasciclin-like arabinogalactan protein 16 OS=Arabidopsis thaliana GN=FLA16 PE=2 SV=1
307.0 [0..16] [436..19]

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Predicted Domain #1
Region A:
Residues: [1-175]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDLSKLLFF LLLTISITTA LPDKPGSGQI NSNSVLVALL DSHYTELAEL VEKALLLQTL  60
   61 EEAVGQHNIT IFAPRNDALE KNLDPEFKSF LLQPKNLKSL QSLLMFHILP KRITSPQFSS 120
  121 AVVSHRTLSN DHLHFTNGKV NSAEITKPDD LTRPDGIIHG IERLLIPRSV QEDFN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.69897
Match: 1w7dA
Description: No description for 1w7dA was found.

Predicted Domain #2
Region A:
Residues: [176-436]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RRRSLRSIAA VLPEGAPEVD PRTHRLKKKP APIPAGAPPV LPVYDAMSPG PSLAPAPAPG  60
   61 PGGPRHHFNG EAQVKDFIHT LLHYGGYNEM ADILVNLTSL ATEMGRLVSE GYVLTVLAPN 120
  121 DEAMAKLTTD QLSEPGAPEQ IMYYHIIPEY QTEESMYNSV RRFGKIRYDS LRFPHKVEAQ 180
  181 EADGSVKFGH GDGSAYLFDP DIYTDGRISV QGIDGVLFPE EKTPVEKKTG VPVVKKAPKP 240
  241 RRGKLMEVAC TMLGSQFPTC Q

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 4.0
Match: 1o70A
Description: Fasciclin I
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle