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View Structure Prediction Details

Protein: STR16_ARATH
Organism: Arabidopsis thaliana
Length: 120 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for STR16_ARATH.

Description E-value Query
Range
Subject
Range
gi|20089631, gi|... - gi|20089631|ref|NP_615706.1| hypothetical protein MA0746 [Methanosarcina acetivorans C2A], gi|199145...
123.0 [0..1] [120..32]

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Predicted Domain #1
Region A:
Residues: [1-120]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEESRVPSS VSVTVAHDLL LAGHRYLDVR TPEEFSQGHA CGAINVPYMN RGASGMSKNP  60
   61 DFLEQVSSHF GQSDNIIVGC QSGGRSIKAT TDLLHAGFTG VKDIVGGYSA WAKNGLPTKA 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.045757
Match: 1tq1A
Description: Solution structure of At5g66040, a putative protein from Arabidosis Thaliana
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.291319994167841 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle