| Protein: | gi|18399235, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 300 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18399235, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
387.0 | [0..1] | [300..1] |
|
Region A: Residues: [1-85] |
1 11 21 31 41 51
| | | | | |
1 MAASISRRIF RTFGSFSALG RSSSPNLSAN TSGNGLASLT NDLKYGMALL SNRKLSTSIL 60
61 TPDDSFPSDL LTKKTVLTPD RTIGQ
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [86-300] |
1 11 21 31 41 51
| | | | | |
1 YQDLVIPVTN FQNEEKGFMV LAGDVFDVPI RKDIIHNVVR WQLAKRQQGT HSTKTLSEVS 60
61 GTGRKPWNQK GTGRARHGTL RGPQFRGGCV MHGPKPRSHA IKMNKQVRRL GLKIALTARA 120
121 AEGKLLVFDD LGLPTHKTKN IVNYYNQMEN TKKVLVVEGG PIDEKLKLAT QNLHYVNIIP 180
181 SIGLNVYSIL LHDTLLMSRD AVNKIVERMH TPINR
|
| Detection Method: | |
| Confidence: | 66.69897 |
| Match: | 1p85C |
| Description: | 70S ribosome functional complex |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| structural constituent of ribosome | 9.46714384821627 | bayes_pls_golite062009 |
| structural molecule activity | 8.89019844429202 | bayes_pls_golite062009 |
| binding | 1.20549540301208 | bayes_pls_golite062009 |
| protein binding | 0.69049990447008 | bayes_pls_golite062009 |
| RNA binding | 0.514741551458219 | bayes_pls_golite062009 |
| nucleic acid binding | 0.491336126355036 | bayes_pls_golite062009 |
