| Protein: | gi|15240941, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 506 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15240941, gi|....
| Description | E-value | Query Range |
Subject Range |
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422.0 | [0..55] | [505..8] |
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422.0 | [0..56] | [505..1] |
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421.0 | [0..56] | [503..4] |
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419.0 | [0..56] | [505..1] |
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419.0 | [0..56] | [505..1] |
|
|
416.0 | [0..56] | [505..1] |
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415.0 | [0..56] | [505..1] |
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414.0 | [0..54] | [505..1] |
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413.0 | [0..56] | [503..1] |
|
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412.0 | [0..29] | [505..51] |
|
Region A: Residues: [1-89] |
1 11 21 31 41 51
| | | | | |
1 MASQLLLPPN QFTKSVSPQV FITGDCQGFS DLTLKRKSNQ ATRVSNGSSL RVKAALRSTH 60
61 NKSVVEIPKQ WYNLVADLSV KPPPPLHPK
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.646 | d.93.1 | SH2 domain |
| View | Download | 0.646 | d.93.1 | SH2 domain |
| View | Download | 0.607 | d.129.1 | TATA-box binding protein-like |
| View | Download | 0.574 | d.129.1 | TATA-box binding protein-like |
| View | Download | 0.568 | d.93.1 | SH2 domain |
| View | Download | 0.532 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.532 | d.129.1 | TATA-box binding protein-like |
| View | Download | 0.526 | d.93.1 | SH2 domain |
| View | Download | 0.512 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.295 | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.293 | a.74.1 | Cyclin-like |
| View | Download | 0.273 | a.7.8 | GAT domain |
| View | Download | 0.252 | d.93.1 | SH2 domain |
| View | Download | 0.246 | a.7.8 | GAT domain |
|
Region A: Residues: [90-506] |
1 11 21 31 41 51
| | | | | |
1 TFEPIKPEDL AHLFPNELIK QEATQERFID IPEEVLEIYK LWRPTPLIRA KRLEKLLQTP 60
61 ARIYFKYEGG SPAGSHKPNT AVPQAYYNAK EGVKNVVTET GAGQWGSSLA FASSLFGLDC 120
121 EVWQVANSYH TKPYRRLMMQ TWGAKVHPSP SDLTEAGRRI LESDPSSPGS LGIAISEAVE 180
181 VAARNEDTKY CLGSVLNHVL LHQTIIGEEC IQQMENFGET PDLIIGCTGG GSNFAGLSFP 240
241 FIREKLKGKI NPVIRAVEPS ACPSLTKGVY AYDFGDTAGL TPLMKMHTLG HDFIPDPIHA 300
301 GGLRYHGMAP LISHVYEQGF MEAISIPQIE CFQGAIQFAR TEGIIPAPEP THAIAATIRE 360
361 ALRCKETGEA KVILMAMCGH GHFDLTSYDK YLKGELVDLS FSEEKIRESL SKVPHVV
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| Detection Method: | |
| Confidence: | 104.0 |
| Match: | 1v8zA |
| Description: | X-ray crystal structure of the Tryptophan Synthase b2 Subunit from Hyperthermophile, Pyrococcus furiosus |
Matching Structure (courtesy of the PDB): |
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