| Protein: | PME58_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 571 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PME58_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
552.0 | [0..3] | [570..8] |
|
Region A: Residues: [1-209] |
1 11 21 31 41 51
| | | | | |
1 MGVDGELKKK KCIIAGVITA LLVLMVVAVG ITTSRNTSHS EKIVPVQIKT ATTAVEAVCA 60
61 PTDYKETCVN SLMKASPDST QPLDLIKLGF NVTIRSIEDS IKKASVELTA KAANDKDTKG 120
121 ALELCEKLMN DATDDLKKCL DNFDGFSIPQ IEDFVEDLRV WLSGSIAYQQ TCMDTFEETN 180
181 SKLSQDMQKI FKTSRELTSN GLAMITNIS
|
| Detection Method: |  |
| Confidence: | 20.522879 |
| Match: | 1xg2B |
| Description: | Crystal structure of the complex between pectin methylesterase and its inhibitor protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [210-571] |
1 11 21 31 41 51
| | | | | |
1 NLLGEFNVTG VTGDLGKYAR KLLSAEDGIP SWVGPNTRRL MATKGGVKAN VVVAHDGSGQ 60
61 YKTINEALNA VPKANQKPFV IYIKQGVYNE KVDVTKKMTH VTFIGDGPTK TKITGSLNYY 120
121 IGKVKTYLTA TVAINGDNFT AKNIGFENTA GPEGHQAVAL RVSADLAVFY NCQIDGYQDT 180
181 LYVHSHRQFF RDCTVSGTVD FIFGDGIVVL QNCNIVVRKP MKSQSCMITA QGRSDKREST 240
241 GLVLQNCHIT GEPAYIPVKS INKAYLGRPW KEFSRTIIMG TTIDDVIDPA GWLPWNGDFA 300
301 LNTLYYAEYE NNGPGSNQAQ RVKWPGIKKL SPKQALRFTP ARFLRGNLWI PPNRVPYMGN 360
361 FQ
|
| Detection Method: | |
| Confidence: | 96.221849 |
| Match: | 1gq8A |
| Description: | Pectin methylesterase PemA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.142826098671881 | bayes_pls_golite062009 |
