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View Structure Prediction Details

Protein: gi|10177037, gi|...
Organism: Arabidopsis thaliana
Length: 426 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|10177037, gi|....

Description E-value Query
Range
Subject
Range
gi|186682770, gi... - gi|23128859|ref|ZP_00110697.1| COG1020: Non-ribosomal peptide synthetase modules and related protein...
327.0 [0..21] [426..42]

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Predicted Domain #1
Region A:
Residues: [1-426]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADSFELIVT RKEPVLVSPA SETPKGLHYL SNLDQNIAII VKTFYYFKSN SRSNEESYEV  60
   61 IKKSLSEVLV HYYPAAGRLT ISPEGKIAVD CTGEGVVVVE AEANCGIEKI KKAISEIDQP 120
  121 ETLEKLVYDV PGARNILEIP PVVVQVTNFK CGGFVLGLGM NHNMFDGIAA MEFLNSWAET 180
  181 ARGLPLSVPP FLDRTLLRPR TPPKIEFPHN EFEDLEDISG TGKLYSDEKL VYKSFLFGPE 240
  241 KLERLKIMAE TRSTTFQTLT GFLWRARCQA LGLKPDQRIK LLFAADGRSR FVPELPKGYS 300
  301 GNGIVFTYCV TTAGEVTLNP LSHSVCLVKR AVEMVNDGFM RSAIDYFEVT RARPSLTATL 360
  361 LITSWAKLSF HTKDFGWGEP VVSGPVGLPE KEVILFLPCG SDTKSINVLL GLPGSAMKVF 420
  421 QGIMDI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 52.522879
Match: 2bghA
Description: Crystal structure of Vinorine Synthase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle