| Protein: | CCS1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 547 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CCS1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
512.0 | [0..5] | [547..10] |
|
Region A: Residues: [1-86] |
1 11 21 31 41 51
| | | | | |
1 MIVTLNPKIL HFSKIHPFSR PSSYLCRTRN VSLITNCKLQ KPQDGNQRSS SNRNLTKTIS 60
61 LSDSAPPVTE ETGDGIVKGG GNGGGG
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [87-187] |
1 11 21 31 41 51
| | | | | |
1 GGDGRGGLGF LKILPRKVLS VLSNLPLAIT EMFTIAALMA LGTVIEQGET PDFYFQKYPE 60
61 DNPVLGFFTW RWISTLGLDH MYSAPIFLGM LVLLAASLMA C
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [188-298] |
1 11 21 31 41 51
| | | | | |
1 TYTTQIPLVK VARRWSFMKS DEAIKKQEFA DTLPRASIQD LGMILMGDGF EVFMKGPSLY 60
61 AFKGLAGRFA PIGVHIAMLL IMVGGTLSAT GSFRGSVTVP QGLNFVMGDV L
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [299-368] |
1 11 21 31 41 51
| | | | | |
1 APIGFFSIPT DAFNTEVHVN RFTMDYYDSG EVSQFHSDLS LRDLNGKEVL RKTISVNDPL 60
61 RYGGVTVYQT
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.877 | N/A | N/A | d.50.1 | dsRNA-binding domain-like |
|
Region A: Residues: [369-443] |
1 11 21 31 41 51
| | | | | |
1 DWSFSALQVT KDGEGPFNLA MAPIKINGDK KLYGTFLPVG DTNAPNVKGI SMLARDLQSI 60
61 VVYDLDGKFA GIRRP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [444-547] |
1 11 21 31 41 51
| | | | | |
1 SSKLPIEING MKIVIEDAIG STGLELKTDP GVPVVYAGFG ALMLTTCISY LSHSQIWALQ 60
61 NGTALVVGGK TNRAKNQFPD DMNRLLDQVP ELIKKNTSVV SEQS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
