YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|23296346, gi|...
Organism: Arabidopsis thaliana
Length: 495 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|23296346, gi|....

Description E-value Query
Range
Subject
Range
gi|15229058, gi|... - gi|67633678|gb|AAY78763.1| glycoside hydrolase family 28 protein [Arabidopsis thaliana], gi|6522571|...
360.0 [0..40] [489..18]

Back

Predicted Domain #1
Region A:
Residues: [1-495]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSLSTAGYL LLLLLLPISY DGGFIGAADA EHDLRATDLH NHRHRRHRNH HRGEEFEYSA  60
   61 ISCRAYSASL DEFGAVGDGV TSNTAAFRDA VSQLSRFADY GGSLLFVPAG RWLTGNFNLT 120
  121 SHFTLFLHRD AVILASQEES DYEVIEPLPS YGRGRDTDGG RFISLLFGSN LTDVVITGEN 180
  181 GTIDGQGEPW WGKFKRGELK YTRPYLIEIM HSDGIQISNL TFLNSPSWHI HPVYSSNIYI 240
  241 QGLTILAPVT VPNTDGINPD SCTNTRIEDC YIVSGDDCIA VKSGWDQYGI NYGMPTKQLL 300
  301 IRRLTCISPD SAVIALGSEM SGGIEDVRAE DIVAINSESG IRIKTAIGRG GYVKDVYVRG 360
  361 MTMMTMKYVF WMTGSYGSHP DDHYDPKALP VIQNINYQDM VAENVTMPAQ LAGISGDQFT 420
  421 GICISNVTIT LSKKPKKVLW NCTDVSGYTS GVTPQPCQLL PEKQPGTVVP CNFPEDPIPI 480
  481 DEVKLQRCYS RRRNM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 51.09691
Match: 2uveA
Description: No description for 2uveA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle