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View Structure Prediction Details

Protein: MDHP_ARATH
Organism: Arabidopsis thaliana
Length: 403 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MDHP_ARATH.

Description E-value Query
Range
Subject
Range
gi|7431178, gi|2... - pir||T09294 malate dehydrogenase (EC 1.1.1.37) precursor - alfalfa, gi|2827084|gb|AAB99757.1| malate...
375.0 [0..1] [401..1]

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Predicted Domain #1
Region A:
Residues: [1-403]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATATSASLF STVSSSYSKA SSIPHSRLQS VKFNSVPSFT GLKSTSLISG SDSSSLAKTL  60
   61 RGSVTKAQTS DKKPYGFKIN ASYKVAVLGA AGGIGQPLSL LIKMSPLVST LHLYDIANVK 120
  121 GVAADLSHCN TPSQVRDFTG PSELADCLKD VNVVVIPAGV PRKPGMTRDD LFNINANIVK 180
  181 TLVEAVAENC PNAFIHIISN PVNSTVPIAA EVLKKKGVYD PKKLFGVTTL DVVRANTFVS 240
  241 QKKNLKLIDV DVPVIGGHAG ITILPLLSKT KPSVNFTDEE IQELTVRIQN AGTEVVDAKA 300
  301 GAGSATLSMA YAAARFVESS LRALDGDGDV YECSFVESTL TDLPFFASRV KIGKNGLEAV 360
  361 IESDLQGLTE YEQKALEALK VELKASIDKG VAFANKPAAA AAN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 84.0
Match: 1sevA
Description: Mature and translocatable forms of glyoxysomal malate dehydrogenase have different activities and stabilities but similar crystal structures
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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