| Protein: | NFYC1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 234 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NFYC1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
166.0 | [0..4] | [234..15] |
|
Region A: Residues: [1-144] |
1 11 21 31 41 51
| | | | | |
1 MDTNNQQPPP SAAGIPPPPP GTTISAAGGG ASYHHLLQQQ QQQLQLFWTY QRQEIEQVND 60
61 FKNHQLPLAR IKKIMKADED VRMISAEAPI LFAKACELFI LELTIRSWLH AEENKRRTLQ 120
121 KNDIAAAITR TDIFDFLVDI VPRD
|
| Detection Method: |  |
| Confidence: | 18.69897 |
| Match: | 1n1jB |
| Description: | Nuclear transcription factor Y subunit gamma (Nf-Yc2) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.581886805340955 | bayes_pls_golite062009 |
|
Region A: Residues: [145-234] |
1 11 21 31 41 51
| | | | | |
1 EIKDEAAVLG GGMVVAPTAS GVPYYYPPMG QPAGPGGMMI GRPAMDPNGV YVQPPSQAWQ 60
61 SVWQTSTGTG DDVSYGSGGS SGQGNLDGQG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
