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View Structure Prediction Details

Protein: ISOA1_ARATH
Organism: Arabidopsis thaliana
Length: 783 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ISOA1_ARATH.

Description E-value Query
Range
Subject
Range
gi|27728145 - gi|27728145|gb|AAN15317.1| isoamylase isoform 1 [Solanum tuberosum]
610.0 [0..1] [782..1]

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Predicted Domain #1
Region A:
Residues: [1-783]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDAIKCSSSF LHHTKLNTLF SNHTFPKISA PNFKPLFRPI SISAKDRRSN EAENIAVVEK  60
   61 PLKSDRFFIS DGLPSPFGPT VRDDGVNFSV YSTNSVSATI CLISLSDLRQ NKVTEEIQLD 120
  121 PSRNRTGHVW HVFLRGDFKD MLYGYRFDGK FSPEEGHYYD SSNILLDPYA KAIISRDEFG 180
  181 VLGPDDNCWP QMACMVPTRE EEFDWEGDMH LKLPQKDLVI YEMHVRGFTR HESSKIEFPG 240
  241 TYQGVAEKLD HLKELGINCI ELMPCHEFNE LEYYSYNTIL GDHRVNFWGY STIGFFSPMI 300
  301 RYASASSNNF AGRAINEFKI LVKEAHKRGI EVIMDVVLNH TAEGNEKGPI FSFRGVDNSV 360
  361 YYMLAPKGEF YNYSGCGNTF NCNHPVVRQF ILDCLRYWVT EMHVDGFRFD LGSIMSRSSS 420
  421 LWDAANVYGA DVEGDLLTTG TPISCPPVID MISNDPILRG VKLIAEAWDA GGLYQVGMFP 480
  481 HWGIWSEWNG KFRDVVRQFI KGTDGFSGAF AECLCGSPNL YQGGRKPWHS INFICAHDGF 540
  541 TLADLVTYNN KNNLANGEEN NDGENHNYSW NCGEEGDFAS ISVKRLRKRQ MRNFFVSLMV 600
  601 SQGVPMIYMG DEYGHTKGGN NNTYCHDNYM NYFRWDKKEE AHSDFFRFCR ILIKFRDECE 660
  661 SLGLNDFPTA KRLQWHGLAP EIPNWSETSR FVAFSLVDSV KKEIYVAFNT SHLATLVSLP 720
  721 NRPGYRWEPF VDTSKPSPYD CITPDLPERE TAMKQYRHFL DANVYPMLSY SSIILLLSPI 780
  781 KDP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 93.0
Match: 1bf2A
Description: STRUCTURE OF PSEUDOMONAS ISOAMYLASE
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity, acting on glycosyl bonds 3.1190602686215 bayes_pls_golite062009
hydrolase activity, hydrolyzing O-glycosyl compounds 2.98773241907716 bayes_pls_golite062009
hydrolase activity 2.87134532188836 bayes_pls_golite062009
catalytic activity 2.22613067995402 bayes_pls_golite062009
glycogen debranching enzyme activity 1.61342226744611 bayes_pls_golite062009
1,4-alpha-glucan branching enzyme activity 0.72343541139639 bayes_pls_golite062009
chitinase activity 0.67854733864231 bayes_pls_golite062009
glucosidase activity 0.58717079348538 bayes_pls_golite062009
hexosaminidase activity 0.16438321606077 bayes_pls_golite062009
cation transmembrane transporter activity 0.15340916113777 bayes_pls_golite062009
amylase activity 0.0914002140078796 bayes_pls_golite062009
alpha-amylase activity 0.0521244165288097 bayes_pls_golite062009

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