| Protein: | gi|20260644, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 392 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20260644, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
472.0 | [0..1] | [392..1] |
|
|
308.0 | [0..111] | [378..19] |
|
|
304.0 | [0..81] | [392..32] |
|
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304.0 | [0..106] | [383..30] |
|
|
303.0 | [0..106] | [383..37] |
|
|
301.0 | [0..104] | [389..53] |
|
|
298.0 | [0..68] | [378..13] |
|
|
296.0 | [0..88] | [384..9] |
|
Region A: Residues: [1-133] |
1 11 21 31 41 51
| | | | | |
1 MIYLSRRSLS SLLRSGFNLR GDLTAAAVSC SSLFSDADGG IKKLHSRAGN AVLWRNSQLC 60
61 SSQGSFFGRG GQVSGSVFRC FCSGSDTSPP SLDRKFLAQL WVADKKKLKA MEKRYKKASK 120
121 HRNYTENDGF DVH
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.807 | a.118.1 | ARM repeat |
| View | Download | 0.796 | a.118.1 | ARM repeat |
| View | Download | 0.466 | a.118.8 | TPR-like |
| View | Download | 0.453 | d.211.1 | Ankyrin repeat |
| View | Download | 0.453 | d.211.1 | Ankyrin repeat |
| View | Download | 0.435 | a.118.8 | TPR-like |
| View | Download | 0.435 | a.118.8 | TPR-like |
| View | Download | 0.429 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.423 | a.182.1 | GatB/YqeY domain |
| View | Download | 0.421 | a.1.1 | Globin-like |
| View | Download | 0.310 | d.110.4 | SNARE-like |
|
Region A: Residues: [134-392] |
1 11 21 31 41 51
| | | | | |
1 FETVEPTVEQ PPVSQSMSGL LKPKTSDEAK IATLLARSNL LVTRDIEWAN LVLGFEQENR 60
61 YIVVDVCYPE APVGSIREQS NLLARQLLRT RRPFVASITD ALGNELFRVR RPFWWLTSSI 120
121 YAEIDGEEIG VVHRRWHLWR RIYDLYLGNN QFAVVENPGF WNWTFTVKDA DGEVLAQIDR 180
181 DWRGFGFEIF TDAGQYVIRF GKADAAAKTG PATLVEELEV KRPLTLSERA VVLTLAISLD 240
241 NDYFSRHGGW GIPFMAVGE
|
| Detection Method: | |
| Confidence: | 1.08 |
| Match: | 1zxuA |
| Description: | X-ray structure of protein from arabidopsis thaliana AT5G01750 |
Matching Structure (courtesy of the PDB): |
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