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View Structure Prediction Details

Protein: KCS10_ARATH
Organism: Arabidopsis thaliana
Length: 550 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KCS10_ARATH.

Description E-value Query
Range
Subject
Range
gi|8177723 - gi|8177723|gb|AAF73979.1|AF214502_1 fiddlehead protein [Arabidopsis thaliana]
574.0 [0..1] [550..1]

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Predicted Domain #1
Region A:
Residues: [1-82]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRSNEQDLL STEIVNRGIE PSGPNAGSPT FSVRVRRRLP DFLQSVNLKY VKLGYHYLIN  60
   61 HAVYLATIPV LVLVFSAEVG SL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [83-550]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SREEIWKKLW DYDLATVIGF FGVFVLTACV YFMSRPRSVY LIDFACYKPS DEHKVTKEEF  60
   61 IELARKSGKF DEETLGFKKR ILQASGIGDE TYVPRSISSS ENITTMKEGR EEASTVIFGA 120
  121 LDELFEKTRV KPKDVGVLVV NCSIFNPTPS LSAMVINHYK MRGNILSYNL GGMGCSAGII 180
  181 AIDLARDMLQ SNPNSYAVVV STEMVGYNWY VGSDKSMVIP NCFFRMGCSA VMLSNRRRDF 240
  241 RHAKYRLEHI VRTHKAADDR SFRSVYQEED EQGFKGLKIS RDLMEVGGEA LKTNITTLGP 300
  301 LVLPFSEQLL FFAALLRRTF SPAAKTSTTT SFSTSATAKT NGIKSSSSDL SKPYIPDYKL 360
  361 AFEHFCFHAA SKVVLEELQK NLGLSEENME ASRMTLHRFG NTSSSGIWYE LAYMEAKESV 420
  421 RRGDRVWQIA FGSGFKCNSV VWKAMRKVKK PTRNNPWVDC INRYPVPL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 104.0
Match: 1bi5A
Description: Chalcone synthase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.61499311836466 bayes_pls_golite062009
transferase activity 1.02674433736465 bayes_pls_golite062009
transferase activity, transferring acyl groups 0.95018443969363 bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups 0.71137845857094 bayes_pls_golite062009
acyltransferase activity 0.57223728364314 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle