YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|20198102, gi|...
Organism: Arabidopsis thaliana
Length: 414 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20198102, gi|....

Description E-value Query
Range
Subject
Range
gi|21537344 - gi|21537344|gb|AAM61685.1| putative protein kinase [Arabidopsis thaliana]
376.0 [0..1] [414..1]

Back

Predicted Domain #1
Region A:
Residues: [1-414]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLCWGSPSD SPPTTTPSST GNISSVGTFK SSNNTTTTGT SRGSNISSNS GFSVASGEDA  60
   61 YPDGQILPIP NLRIFSLAEL RASTRNFRSE NVLGEGGFGK VFKGWLEDKT PGKQSNGTVI 120
  121 AVKKLNAESF QGFEEWQCEV NFLGRVSHPN LVKLLGYCLE GEELLLVYEY MQKGSLENHL 180
  181 FRKGSAVQPL SWEIRLKIAI GAAKGLAFLH ASEKQVIYRD FKASNILLDG SYNAKISDFG 240
  241 LAKLGPSASQ SHITTRVMGT HGYAAPEYVA TGHLYVKSDV YGFGVVLAEI LTGLHALDPT 300
  301 RPTGQHNLTE WIKPHLSERR KLRSIMDPRL EGKYPFKSAF RVAQLALKCL GPEPKNRPSM 360
  361 KEVVESLELI EAANEKPLER RTTRASPSIR QQQGHYRPQQ LSSFRPRQNV SRAH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 69.522879
Match: 2qkwB
Description: No description for 2qkwB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle