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View Structure Prediction Details

Protein: ALMT9_ARATH
Organism: Arabidopsis thaliana
Length: 598 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ALMT9_ARATH.

Description E-value Query
Range
Subject
Range
ALMT5_ARATH - Aluminum-activated malate transporter 5 OS=Arabidopsis thaliana GN=ALMT5 PE=1 SV=1
363.0 [0..38] [576..8]
gi|58743493 - gi|58743493|gb|AAW81734.1| Putative expressed protein [Brassica oleracea]
355.0 [0..31] [573..35]
gi|125541004 - gi|125541004|gb|EAY87399.1| hypothetical protein OsI_08806 [Oryza sativa Indica Group]
gi|46390863, gi|... - gi|50912417|ref|XP_467616.1| putative aluminum-activated malate transporter [Oryza sativa (japonica ...
316.0 [0..77] [598..68]

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Predicted Domain #1
Region A:
Residues: [1-252]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAKQGSFRH GILEKRERLL SNNGFSDFRF TDIESNDLLE NENCGRRTRL CCCCSCGNLS  60
   61 EKISGVYDDA KDVARKAWEM GVSDPRKIVF SAKIGLALTI VALLIFYQEP NPDLSRYSVW 120
  121 AILTVVVVFE FTIGATLSKG FNRALGTLSA GGLALGMAEL STLFGDWEEI FCTLSIFCIG 180
  181 FLATFMKLYP SMKAYEYGFR VFLLTYCYIL ISGFRTGQFI EVAISRFLLI ALGAGVSLGV 240
  241 NMFIYPIWAG ED

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [253-489]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LHNLVVKNFM NVATSLEGCV NGYLRCLEYE RIPSKILTYQ ASEDPVYKGY RSAVESTSQE  60
   61 ESLMSFAIWE PPHGPYKSFN YPWKNYVKLS GALKHCAFTV MALHGCILSE IQAPEERRQV 120
  121 FRQELQRVGV EGAKLLRELG EKVKKMEKLG PVDLLFEVHL AAEELQHKID KKSYLLVNSE 180
  181 CWEIGNRATK ESEPQELLSL EDSDPPENHA PPIYAFKSLS EAVLEIPPSW GEKNHRE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [490-598]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ALNHRPTFSK QVSWPARLVL PPHLETTNGA SPLVETTKTY ESASALSLAT FASLLIEFVA  60
   61 RLQNVVDAFK ELSQKANFKE PEIVTTGTDV EFSGERVGLG QKIRRCFGM

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle