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View Structure Prediction Details

Protein: Y3565_ARATH
Organism: Arabidopsis thaliana
Length: 499 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y3565_ARATH.

Description E-value Query
Range
Subject
Range
gi|13897310, gi|... - gi|162463139|ref|NP_001105133.1| somatic embryogenesis receptor-like kinase2 [Zea mays], gi|13897310...
354.0 [0..1] [472..91]

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Predicted Domain #1
Region A:
Residues: [1-183]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNNWKSVRL RLQNRTLVFL LVILSFGSCY SLKSQGDGFL ESVTKDLWSD IDAEDLRAVG  60
   61 FHRKLLGRFR NPYTHLNAFR DRPVARATPP SSSVSTRPDA KRSSTLPPPQ KSPPAQHVSA 120
  121 PPPFVHHVTL PSLTSSSKTS SNSTIPIVAG CIAGAVFILL LATGVFFFKS KAGKSVNPWR 180
  181 TGL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 6.221849
Match: 2omyA
Description: No description for 2omyA was found.

Predicted Domain #2
Region A:
Residues: [184-499]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SGQLQKVFIT GVPKLKRSEI EAACEDFSNV IGSCPIGTLF KGTLSSGVEI AVASVATASA  60
   61 KEWTNNIEMQ FRKKIEMLSK INHKNFVNLL GYCEEEEPFT RILVFEYASN GTVFEHLHYK 120
  121 ESEHLDWVMR LRIAMGIAYC LDHMHGLKPP IVHSNLLSSS VQLTEDYAVK IADFNFGYLK 180
  181 GPSETESSTN ALIDTNISET TQEDNVHSFG LLLFELMTGK LPESVQKGDS IDTGLAVFLR 240
  241 GKTLREMVDP TIESFDEKIE NIGEVIKSCI RADAKQRPIM KEVTGRLREI TGLSPDDTIP 300
  301 KLSPLWWAEL EVLSTA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 55.09691
Match: 2qkwB
Description: No description for 2qkwB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle