| Protein: | CCT1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 332 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CCT1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
287.0 | [0..1] | [332..1] |
|
Region A: Residues: [1-184] |
1 11 21 31 41 51
| | | | | |
1 MSNVIGDRTE DGLSTAAAAS GSTAVQSSPP TDRPVRVYAD GIYDLFHFGH ARSLEQAKLA 60
61 FPNNTYLLVG CCNDETTHKY KGRTVMTAEE RYESLRHCKW VDEVIPDAPW VVNQEFLDKH 120
121 QIDYVAHDSL PYADSSGAGK DVYEFVKKVG RFKETQRTEG ISTSDIIMRI VKDYNQYVMR 180
181 NLDR
|
| Detection Method: |  |
| Confidence: | 30.221849 |
| Match: | 1cozA |
| Description: | CTP:glycerol-3-phosphate cytidylyltransferase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 1.84668360172717 | bayes_pls_golite062009 |
| ligase activity | 0.41353894226697 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 0.1911539125531 | bayes_pls_golite062009 |
| ligase activity, forming aminoacyl-tRNA and related compounds | 0.1911539125531 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 0.178548924377401 | bayes_pls_golite062009 |
|
Region A: Residues: [185-332] |
1 11 21 31 41 51
| | | | | |
1 GYSREDLGVS FVKEKRLRVN MRLKKLQERV KEQQERVGEK IQTVKMLRNE WVENADRWVA 60
61 GFLEIFEEGC HKMGTAIVDS IQERLMRQKS AERLENGQDD DTDDQFYEEY FDHDMGSDDD 120
121 EDEKFYDEEE VKEEETEKTV MTDAKDNK
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.535 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.529 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.447 | N/A | N/A | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.260 | N/A | N/A | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.253 | N/A | N/A | a.22.1 | Histone-fold |
