YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CISY1_ARATH
Organism: Arabidopsis thaliana
Length: 480 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CISY1_ARATH.

Description E-value Query
Range
Subject
Range
CISY_BRAJA - Citrate synthase OS=Bradyrhizobium japonicum GN=gltA PE=3 SV=2
CISY_BRADU - Citrate synthase OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA ...
561.0 [0..44] [478..1]

Back

Predicted Domain #1
Region A:
Residues: [1-480]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEISERARAR LAVLNAHLTV SEPNQVLPAI EPWCTSAHIT AAPHGSLKGN LKIVDERTGN  60
   61 EYQVPVSEHG TVKTVDLKKI TTGKDDKGLN LYDPGYLNTA PVRSSISYID GDEGILRYRG 120
  121 YPVEELAEKS TYTEVTYLLI YGNLPSQRQL ADWEFAISQN SAVPQGVLDM IQSMPNDVHP 180
  181 VGALVTAMSA LSIFYPDANP SLMGLGVYKS KQVRDKQIVR VLGQAPTIAA AAYLRKAGKP 240
  241 PVQPLSNLSY SENFLYMVES MGDRSYKPNP RLARVLDILF ILQAEHEMNC STAAARHLSS 300
  301 SGGDVYTAVS GGVGAIYGPL HGGAVEATIN MLSEIGTVEN IPEFIESVKN KKRRLSGFGH 360
  361 RIYKNYDPRG KVVKKLADEV FSILGRDPLV EVGDALEKAA LSDEYFVKRK LYPNVDFYSG 420
  421 LINRAMGIPS SFTAVSRIAG YLSHWRESLD DPDTKIMRPQ QVYTGAGIRH YETVRERTKL 480
  481 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 152.0
Match: 2h12A
Description: No description for 2h12A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle