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View Structure Prediction Details

Protein: gi|5903083, gi|2...
Organism: Arabidopsis thaliana
Length: 371 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|5903083, gi|2....

Description E-value Query
Range
Subject
Range
gi|27764542 - gi|27764542|gb|AAO23072.1| R 14 protein [Glycine max]
297.0 [0..2] [370..5]

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Predicted Domain #1
Region A:
Residues: [1-153]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSPTATKYD VFLSFRGVDT RRNFISFLYK EFVRRKIRTF KDDKELENGR RISPELKRAI  60
   61 EESKFAVVVV SVNYAASPWC LDELVKIMDF ENKGSITVMP IFYGVDPCHL RRQIGDVAEQ 120
  121 FKKHEAREED HEKVASWRRA LTSLASISGD CSS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.221849
Match: 2j67A
Description: No description for 2j67A was found.

Predicted Domain #2
Region A:
Residues: [154-371]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KCEDEAKLVD EIADKISKNL MTVTTISNGK NLVGIDTHMK ALNKKLDLNS NKSLRVVGIW  60
   61 ARGYNGRSAL AKYVYQDICH HFDSHCFLGS VKRISQGRHL SHLHEEFLIR IQGSKHNLKD 120
  121 QKVLLVADDV YKLEQLDALA EDFNGFGPGS VVIITTQDKH LFVSAGIKLV YEVELLKFQK 180
  181 VCELFRQFAF KKRDISAAVK LVYYRATNWL GCLSGRSG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 6.39794
Match: 1z6tA
Description: Structure of the apoptotic protease-activating factor 1 bound to ADP
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle