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View Structure Prediction Details

Protein: Y1222_ARATH
Organism: Arabidopsis thaliana
Length: 296 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y1222_ARATH.

Description E-value Query
Range
Subject
Range
gi|4240415 - gi|4240415|gb|AAD13546.1| NDP-hexose 4,6-dehydratase homolog [Streptomyces cyanogenus]
187.0 [0..63] [293..2]

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Predicted Domain #1
Region A:
Residues: [1-296]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSFLSFSAI SAHPPTFSGA SFRPRSFSPR LFKSCVKCTY AEAGLSSASW SAPIDIVADV  60
   61 KSERVVVLGG NGFVGSAICK AAISNGIEVV SVSRSGRPNF EDSWLDQVTW VTGDVFYLNW 120
  121 DEVLLGATAV VSTIGGFGNE EQMKRINGEA NVTAVNAAKD FGVPKFVLIT VHDYNLPPFI 180
  181 LSNGYFTGKR NAEAELLSKY PTSGVVLRPG FIYGKRKVNG IEVPLDLVGE PLDKIYDSAE 240
  241 RFIRPLRSLP ASDLILAPPV NVDDLALAVI NAVKDDDFFG IFTIEQIKEA AAKMRA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.69897
Match: 1z7eA
Description: Crystal structure of full length ArnA
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.26736023026862 bayes_pls_golite062009
oxidoreductase activity 0.68812524232244 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle