| Protein: | U2AFB_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 283 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for U2AFB_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
174.0 | [0..1] | [190..1] |
|
Region A: Residues: [1-159] |
1 11 21 31 41 51
| | | | | |
1 MAEHLASIFG TEKDRVNCPF YFKIGACRHG DRCSRLHNRP TISPTLLLSN MYQRPDMITP 60
61 GVDPQGQPLD PSKIQDHFED FYEDIFEELN KFGEVESLNV CDNLADHMIG NVYVLFKEED 120
121 HAAAALQALQ GRFYSGRPII ADFSPVTDFR EATCRQYEE
|
| Detection Method: |  |
| Confidence: | 14.0 |
| Match: | 1jmtA |
| Description: | U2AF35 (35 KDa subunit) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
|
Region A: Residues: [160-283] |
1 11 21 31 41 51
| | | | | |
1 NSCNRGGYCN FMHVKQISRE LRRKLFGRYR RSYRRGSRSR SRSISPRRKR EHSRERERGD 60
61 VRDRDRHGNG KRSSDRSERH DRDGGGRRRH GSPKRSRSPR NVREGSEERR ARIEQWNRER 120
121 DEGV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
