| Protein: | SRRT_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 720 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SRRT_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
523.0 | [0..190] | [720..1] |
|
Region A: Residues: [1-185] |
1 11 21 31 41 51
| | | | | |
1 MADVNLPPSD SVDNRLPEKS TSSSPPPPPP SSSLPQQEQE QDQQQLPLRR ERDSRERRDE 60
61 RDIERPPPNR RERDRSPLPP PRRDYKRRPS LSPPPPYRDR RHSPPQRRSP PQKRYRRDDN 120
121 GYDGRRGSPR GGYGPPDRRF GYDHGGGYDR EMGGRPGYGD ERPHGRFMGR YQDWEGGRGG 180
181 YGDAS
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [186-277] |
1 11 21 31 41 51
| | | | | |
1 NSGNPQRDGL MSYKQFIQEL EDDILPSEAE RRYQEYKSEY ITTQKRAFFN THKEEDWLKN 60
61 KYHPTNLLSV IERRNDLAQK VAKDFLLDLQ SG
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.849 | a.64.1 | Saposin |
| View | Download | 0.638 | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.577 | a.65.1 | Annexin |
| View | Download | 0.550 | a.64.1 | Saposin |
| View | Download | 0.537 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
|
Region A: Residues: [278-381] |
1 11 21 31 41 51
| | | | | |
1 TLDLGPAVTA LNKSGRTSEP NSEDEAAGVG KRKRHGMGGA KENELLSAAP KAPSFTSDPK 60
61 RILTDVEQTQ ALVRKLDSEK KIEENVLQGS ETEKSGREKL HSGS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.225 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.217 | a.118.1 | ARM repeat |
| View | Download | 0.204 | a.47.2 | t-snare proteins |
|
Region A: Residues: [382-543] |
1 11 21 31 41 51
| | | | | |
1 TGPVVIIRGL TSVKGLEGVE LLDTLVTYLW RVHGLDYYGK VETNEAKGLR HVRAEGKVSD 60
61 AKGDENESKF DSHWQERLKG QDPLEVMAAK EKIDAAATEA LDPHVRKIRD EKYGWKYGCG 120
121 AKGCTKLFHA AEFVYKHLKL KHTELVTELT TKVREELYFQ NY
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [544-720] |
1 11 21 31 41 51
| | | | | |
1 MNDPNAPGGQ PATQQSGPRD RPIRRKPSME NRLRDDRGGR RERDGRANGN DRNDRSEDQQ 60
61 RGDNDGGNPG EVGYDAFGGQ GGVHVPPFLS DINPPPMLMP VPGAGPLGPF VPAPPEVAMQ 120
121 MFRDPSGPNP PFEGSGRGGP APFLLSPAFR QDPRRLRSYQ DLDAPEEEVT VIDYRSL
|
| Detection Method: | |
| Confidence: | 1.55 |
| Match: | 1wckA |
| Description: | Crystal structure of the C-terminal domain of BclA, the major antigen of the exosporium of the Bacillus anthracis spore. |
Matching Structure (courtesy of the PDB): |
|
