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View Structure Prediction Details

Protein: PUMP5_ARATH
Organism: Arabidopsis thaliana
Length: 313 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PUMP5_ARATH.

Description E-value Query
Range
Subject
Range
gi|115400063, gi... - gi|115400063|ref|XP_001215620.1| hypothetical protein ATEG_06442 [Aspergillus terreus NIH2624], gi|1...
276.0 [0..3] [309..348]

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Predicted Domain #1
Region A:
Residues: [1-313]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLKGFAEGG IASIVAGCST HPLDLIKVRM QLQGESAPIQ TNLRPALAFQ TSTTVNAPPL  60
   61 RVGVIGVGSR LIREEGMRAL FSGVSATVLR QTLYSTTRMG LYDIIKGEWT DPETKTMPLM 120
  121 KKIGAGAIAG AIGAAVGNPA DVAMVRMQAD GRLPLTDRRN YKSVLDAITQ MIRGEGVTSL 180
  181 WRGSSLTINR AMLVTSSQLA SYDSVKETIL EKGLLKDGLG THVSASFAAG FVASVASNPV 240
  241 DVIKTRVMNM KVVAGVAPPY KGAVDCALKT VKAEGIMSLY KGFIPTVSRQ APFTVVLFVT 300
  301 LEQVKKLFKD YDF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 70.30103
Match: 1okcA
Description: structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle