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View Structure Prediction Details

Protein: PNC1_ARATH
Organism: Arabidopsis thaliana
Length: 322 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PNC1_ARATH.

Description E-value Query
Range
Subject
Range
CMC_DICDI - Calcium-binding mitochondrial carrier protein OS=Dictyostelium discoideum GN=mcfO PE=3 SV=1
gi|60467789, gi|... - gi|66810842|ref|XP_639128.1| EF-hand domain-containing protein [Dictyostelium discoideum AX4], gi|60...
290.0 [0..2] [309..433]

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Predicted Domain #1
Region A:
Residues: [1-322]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVDLESVSE ATSGAIGSLL STTILYPLDT CKSKFQAEVR ARGQQKYRYL SDVMWEAISK  60
   61 GQVFSLYQGL GTKNFQSFIS QFIYFYSYSY FKRVHSERTG SKSIGTKANL LIAAAAGACT 120
  121 SVLIQPLDTA SSRMQTSEFG ESKGLWKTLT EGSWADAFDG LGISLLLTSN PAIQYTVFDQ 180
  181 LKQHLLKQKN AKAENGSSPV VLSAFMAFVL GAVSKSVATV LTYPAIRCKV MIQAADESKE 240
  241 NETKKPRRRT RKTIPGVVYA IWRKEGMLGF FKGLQAQILK TVLSSALLLM IKEKITATTW 300
  301 ILILAIRRTL FLTNTKGKLR SP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 70.69897
Match: 1okcA
Description: structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle