| Protein: | PMTK_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 603 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PMTK_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
504.0 | [0..1] | [603..1] |
|
Region A: Residues: [1-154] |
1 11 21 31 41 51
| | | | | |
1 MKSGKQSSQP EKGTSRILSL TVLFIAFCGF SFYLGGIFCS ERDKIVAKDV TRTTTKAVAS 60
61 PKEPTATPIQ IKSVSFPECG SEFQDYTPCT DPKRWKKYGV HRLSFLERHC PPVYEKNECL 120
121 IPPPDGYKPP IRWPKSREQC WYRNVPYDWI NKQK
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [155-398] |
1 11 21 31 41 51
| | | | | |
1 SNQHWLKKEG DKFHFPGGGT MFPRGVSHYV DLMQDLIPEM KDGTVRTAID TGCGVASWGG 60
61 DLLDRGILSL SLAPRDNHEA QVQFALERGI PAILGIISTQ RLPFPSNAFD MAHCSRCLIP 120
121 WTEFGGIYLL EIHRIVRPGG FWVLSGPPVN YNRRWRGWNT TMEDQKSDYN KLQSLLTSMC 180
181 FKKYAQKDDI AVWQKLSDKS CYDKIAKNME AYPPKCDDSI EPDSAWYTPL RPCVVAPTPK 240
241 VKKS
|
| Detection Method: | |
| Confidence: | 17.69897 |
| Match: | 1kp9A |
| Description: | CmaA1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.723277178398499 | bayes_pls_golite062009 |
| transferase activity | 0.64512166557639 | bayes_pls_golite062009 |
| transferase activity, transferring one-carbon groups | 0.54403439349476 | bayes_pls_golite062009 |
| methyltransferase activity | 0.54389223881989 | bayes_pls_golite062009 |
|
Region A: Residues: [399-603] |
1 11 21 31 41 51
| | | | | |
1 GLGSIPKWPE RLHVAPERIG DVHGGSANSL KHDDGKWKNR VKHYKKVLPA LGTDKIRNVM 60
61 DMNTVYGGFS AALIEDPIWV MNVVSSYSAN SLPVVFDRGL IGTYHDWCEA FSTYPRTYDL 120
121 LHLDSLFTLE SHRCEMKYIL LEMDRILRPS GYVIIRESSY FMDAITTLAK GIRWSCRREE 180
181 TEYAVKSEKI LVCQKKLWFS SNQTS
|
| Detection Method: | |
| Confidence: | 23.39794 |
| Match: | 1ve3A |
| Description: | Crystal structure of PH0226 protein from Pyrococcus horikoshii OT3 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.723277178398499 | bayes_pls_golite062009 |
| transferase activity | 0.64512166557639 | bayes_pls_golite062009 |
| transferase activity, transferring one-carbon groups | 0.54403439349476 | bayes_pls_golite062009 |
| methyltransferase activity | 0.54389223881989 | bayes_pls_golite062009 |
