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View Structure Prediction Details

Protein: GH33_ARATH
Organism: Arabidopsis thaliana
Length: 595 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GH33_ARATH.

Description E-value Query
Range
Subject
Range
gi|4468805, gi|1... - pir||T04733 auxin-regulated protein GH3 homolog F6G17.40 - Arabidopsis thaliana, gi|7270721|emb|CAB...
838.0 [0..1] [595..1]

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Predicted Domain #1
Region A:
Residues: [1-595]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVDSALRSP MMHSPSTKDV KALRFIEEMT RNVDFVQKKV IREILSRNSD TEYLKRFGLK  60
   61 GFTDRKTFKT KVPVVIYDDL KPEIQRIANG DRSMILSSYP ITEFLTSSGT SAGERKLMPT 120
  121 IDEDMDRRQL LYSLLMPVMN LYVPGLDKGK ALYFLFVKTE SKTPGGLPAR PVLTSYYKSE 180
  181 QFKRRPNDPY NVYTSPNEAI LCPDSSQSMY TQMLCGLLMR HEVLRLGAVF ASGLLRAIGF 240
  241 LQTNWKELAD DISTGTLSSR ISDPAIKESM SKILTKPDQE LADFITSVCG QDNSWEGIIT 300
  301 KIWPNTKYLD VIVTGAMAQY IPMLEYYSGG LPMACTMYAS SESYFGINLK PMCKPSEVSY 360
  361 TIMPNMAYFE FLPHHEVPTE KSELVELADV EVGKEYELVI TTYAGLNRYR VGDILQVTGF 420
  421 YNSAPQFKFV RRKNVLLSIE SDKTDEAELQ SAVENASLLL GEQGTRVIEY TSYAETKTIP 480
  481 GHYVIYWELL VKDQTNPPND EVMARCCLEM EESLNSVYRQ SRVADKSIGP LEIRVVKNGT 540
  541 FEELMDYAIS RGASINQYKV PRCVSFTPIM ELLDSRVVST HFSPALPHWS PERRR

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.02
Match: 1t5dX
Description: 4-Chlorobenzoyl-CoA Ligase/Synthetase bound to 4-chlorobenzoate
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.927181813624701 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle