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View Structure Prediction Details

Protein: gi|15226919, gi|...
Organism: Arabidopsis thaliana
Length: 573 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15226919, gi|....

Description E-value Query
Range
Subject
Range
gi|222615549, gi... - gi|222615549|gb|EEE51681.1| hypothetical protein OsJ_33035 [Oryza sativa Japonica Group], gi|2156947...
gi|218185284 - gi|218185284|gb|EEC67711.1| hypothetical protein OsI_35189 [Oryza sativa Indica Group]
579.0 [0..5] [564..36]

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Predicted Domain #1
Region A:
Residues: [1-573]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLFTLSTTS SSSSKLKQHS HQSFSESLME HTIEDAESII HRWISPEHVH SSSFCFISSL  60
   61 FSTENREEAK RFIDAVTTLH SGMIRLISVN PTSMKLVKAE NLMRISMTHL SKEFYRILKS 120
  121 NRRYLDPESV SIRSSKASDS DSDSDSNTMD DLKMIADCMI SSGYSKECFK IYKRIRKSII 180
  181 NEALNQLGFE NLTFSQIQKL EWEVMEKKIR KWLRTTTRAV NTLFSGEQIL SDHVFSSSSS 240
  241 TIRESAFAEI TSQTALALFT FPEKMAKCRK SPEKIFLTLD VYQTIVDLLP KINELFSSDS 300
  301 TSTVRSQVDL TLVNLREGVV SMIDEFESSI SKESSKSLIS GGGIHQLTRY VMNFIVFLAD 360
  361 YSDTLSDIIS KPSLPSPEEE KDSGDSSPVK SRISRLILFL LCKIDAKSRL YNDVALSYLF 420
  421 LINNVNYVVV KVRSSNLKTV LSEDWVKKHE AKVKKYVAKF EEIVWGEMMT SLSDDVTMTA 480
  481 EEGIKRFSDG FEEAYKRQTG WIVPDSKLRD EIKRSVGMMI IPRYSGFCER NRVRLLENVG 540
  541 FDPEDIGNYL SDLYFGSGGS GSGSSVHSSG SSV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 116.0
Match: 2pftA
Description: No description for 2pftA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle