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View Structure Prediction Details

Protein: GATL6_ARATH
Organism: Arabidopsis thaliana
Length: 346 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GATL6_ARATH.

Description E-value Query
Range
Subject
Range
gi|21554300 - gi|21554300|gb|AAM63375.1| putative glycosyl transferase [Arabidopsis thaliana]
305.0 [0..1] [346..1]

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Predicted Domain #1
Region A:
Residues: [1-346]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLWITRFAGL FSAAMAVIVL SPSLQSFPPA AAIRSSPSPI FRKAPAVFNN GDECLSSGGV  60
   61 CNPSLVHVAI TLDVEYLRGS IAAVNSILQH SVCPESVFFH FIAVSEETNL LESLVRSVFP 120
  121 RLKFNIYDFA PETVRGLISS SVRQALEQPL NYARSYLADL LEPCVNRVIY LDSDLVVVDD 180
  181 IAKLWKTSLG SRIIGAPEYC HANFTKYFTG GFWSEERFSG TFRGRKPCYF NTGVMVIDLK 240
  241 KWRRGGYTKR IEKWMEIQRR ERIYELGSLP PFLLVFSGHV APISHRWNQH GLGGDNVRGS 300
  301 CRDLHPGPVS LLHWSGSGKP WIRLDSKRPC PLDALWTPYD LYRHSH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 38.69897
Match: 1zcvA
Description: apo form of a mutant of glycogenin in which Asp159 is replaced by Asn
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.3567084433464 bayes_pls_golite062009
transferase activity 1.04375515050786 bayes_pls_golite062009

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