| Protein: | PME3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 592 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PME3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
613.0 | [0..1] | [592..1] |
|
Region A: Residues: [1-218] |
1 11 21 31 41 51
| | | | | |
1 MAPSMKEIFS KDNFKKNKKL VLLSAAVALL FVAAVAGISA GASKANEKRT LSPSSHAVLR 60
61 SSCSSTRYPE LCISAVVTAG GVELTSQKDV IEASVNLTIT AVEHNYFTVK KLIKKRKGLT 120
121 PREKTALHDC LETIDETLDE LHETVEDLHL YPTKKTLREH AGDLKTLISS AITNQETCLD 180
181 GFSHDDADKQ VRKALLKGQI HVEHMCSNAL AMIKNMTD
|
| Detection Method: |  |
| Confidence: | 22.30103 |
| Match: | 1xg2B |
| Description: | Crystal structure of the complex between pectin methylesterase and its inhibitor protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [219-592] |
1 11 21 31 41 51
| | | | | |
1 TDIANFEQKA KITSNNRKLK EENQETTVAV DIAGAGELDS EGWPTWLSAG DRRLLQGSGV 60
61 KADATVAADG SGTFKTVAAA VAAAPENSNK RYVIHIKAGV YRENVEVAKK KKNIMFMGDG 120
121 RTRTIITGSR NVVDGSTTFH SATVAAVGER FLARDITFQN TAGPSKHQAV ALRVGSDFSA 180
181 FYNCDMLAYQ DTLYVHSNRQ FFVKCLIAGT VDFIFGNAAV VLQDCDIHAR RPNSGQKNMV 240
241 TAQGRTDPNQ NTGIVIQKCR IGATSDLQSV KGSFPTYLGR PWKEYSQTVI MQSAISDVIR 300
301 PEGWSEWTGT FALNTLTYRE YSNTGAGAGT ANRVKWRGFK VITAAAEAQK YTAGQFIGGG 360
361 GWLSSTGFPF SLGL
|
| Detection Method: | |
| Confidence: | 106.0 |
| Match: | 1gq8A |
| Description: | Pectin methylesterase PemA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.142826098671881 | bayes_pls_golite062009 |
