YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|18398038, gi|...
Organism: Arabidopsis thaliana
Length: 329 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18398038, gi|....

Description E-value Query
Range
Subject
Range
gi|108875064, gi... - gi|157120092|ref|XP_001659586.1| host cell factor C1 [Aedes aegypti], gi|108875064|gb|EAT39289.1| ho...
278.0 [0..9] [325..25]

Back

Predicted Domain #1
Region A:
Residues: [1-329]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATPMEGKW VQLKQKGTGP GARSSHAIAL VGNKMYAFGG EFQPRVPVDN QLYVFDLETQ  60
   61 TWSIQEASGD APPPRVGVAM AAVGPIIYFF GGRDSTHQEL NELYCFNTLT NQWKLLSSGE 120
  121 TGPQNRSYHS ITADSQNVYV FGGCGVDGRL NDLWAYNVVD QKWIKFPSPG EACRGRGGPG 180
  181 LEVVQGKIWV VYGFAGEEAD DVHCFDIAKG EWKEVETKGE KPSARSVFST AVVGKQILIS 240
  241 GGEIDPSDLG HMGAGCFTGD AYGLDTETLE WRKWEDGVGS VEHPGPRGWC AFAAGSRDGK 300
  301 QGLLVYGGNS PSNDRLDDIF FFTPNTLLK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 61.39794
Match: 1x2jA
Description: Structural basis for the defects of human lung cancer somatic mutations in the repression activity of Keap1 on Nrf2
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle