| Protein: | NAC17_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 557 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NAC17_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
489.0 | [0..1] | [554..1] |
|
|
420.0 | [0..1] | [553..1] |
|
Region A: Residues: [1-189] |
1 11 21 31 41 51
| | | | | |
1 MADSSPDSCF KGGKFSAPGF RFHPTDEELV MYYLKRKICR KRLRVNVIGV VDVYKMDPEE 60
61 LPGQSMLKTG DRQWFYFTPR SRKYPNAARS NRGTENGYWK ATGKDRVIEY NSRSVGLKKT 120
121 LVFYRGRAPS GERTDWVMHE YTMDEDELGR CKNPQEYYAL YKLFKKSGAG PKNGEQYGAP 180
181 FQEEEWVDD
|
| Detection Method: |  |
| Confidence: | 64.154902 |
| Match: | 1ut4A |
| Description: | Structure of the conserved domain of ANAC, a member of the NAC family of transcription factors |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [190-262] |
1 11 21 31 41 51
| | | | | |
1 DNEDVNAIAV AVPEQPVVRY EDARRVDERR LFNPVILQLE DIDELLNGIP NAPGVPQRCI 60
61 PQVNSEEELQ STL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.553 | d.15.3 | MoaD/ThiS |
| View | Download | 0.513 | g.3.7 | Scorpion toxin-like |
| View | Download | 0.489 | a.36.1 | Signal peptide-binding domain |
| View | Download | 0.489 | a.36.1 | Signal peptide-binding domain |
| View | Download | 0.459 | a.65.1 | Annexin |
| View | Download | 0.459 | a.65.1 | Annexin |
| View | Download | 0.425 | a.230.1 | Description not found. |
| View | Download | 0.373 | a.36.1 | Signal peptide-binding domain |
| View | Download | 0.349 | a.36.1 | Signal peptide-binding domain |
| View | Download | 0.313 | a.35.1 | lambda repressor-like DNA-binding domains |
|
Region A: Residues: [263-329] |
1 11 21 31 41 51
| | | | | |
1 VNNSAREFLP NGQQYNRPSS FDSLETAEVT SAPLVFEKED FIEMDDLLLI PEFGASSTEK 60
61 AAQFSNH
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.422 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.366 | a.140.2 | SAP domain |
| View | Download | 0.304 | a.60.2 | RuvA domain 2-like |
| View | Download | 0.303 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.275 | a.64.2 | Bacteriocin AS-48 |
| View | Download | 0.262 | a.64.2 | Bacteriocin AS-48 |
| View | Download | 0.208 | a.60.1 | SAM/Pointed domain |
|
Region A: Residues: [330-452] |
1 11 21 31 41 51
| | | | | |
1 GEFDDFNEFD QLFHDVSMSL DMEPIDQGTS ANLSSLSDSA NYTSDQKQQL LYQQFQDQTP 60
61 ENQLNNIMDP STTLNQITSD IWFEDDQAIL FDQQQSFSGA FASPSSGVMP DSTNPTMSVN 120
121 AQG
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.766 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.766 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.581 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.450 | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.450 | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.370 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.328 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.208 | d.58.30 | 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK |
|
Region A: Residues: [453-557] |
1 11 21 31 41 51
| | | | | |
1 HEIQNGGGTT SQFSSALWAL MDSIPSTPAS ACEGPLNRTF VRMSSFSRMR FNGKANGTPV 60
61 STTIAKKGIR NRGFLLLSIV GALCAIFWVL VATVRVSGRS LLLKD
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.727 | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.727 | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.715 | d.39.1 | Dynein light chain 8 (DLC8) |
| View | Download | 0.706 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.706 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.696 | a.4.1 | Homeodomain-like |
| View | Download | 0.678 | d.47.1 | Ribosomal protein L11, N-terminal domain |
| View | Download | 0.669 | a.4.1 | Homeodomain-like |
