| Protein: | EFGC_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 783 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EFGC_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
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754.0 | [0..1] | [783..1] |
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737.0 | [0..89] | [780..3] |
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737.0 | [0..89] | [780..3] |
|
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736.0 | [0..89] | [780..3] |
|
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736.0 | [0..89] | [780..3] |
|
|
736.0 | [0..89] | [780..3] |
|
|
734.0 | [0..88] | [780..2] |
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734.0 | [0..88] | [780..2] |
|
|
734.0 | [0..89] | [781..3] |
|
|
733.0 | [0..89] | [780..3] |
|
Region A: Residues: [1-89] |
1 11 21 31 41 51
| | | | | |
1 MAADALRISS SSSGSLVCNL NGSQRRPVLL PLSHRATFLG LPPRASSSSI SSSIPQFLGT 60
61 SRIGLGSSKL SQKKKQFSVF AAAEAEAKR
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.573 | c.55.4 | Translational machinery components |
| View | Download | 0.530 | a.28.2 | Colicin E immunity proteins |
| View | Download | 0.499 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.467 | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.449 | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.447 | a.230.1 | Description not found. |
| View | Download | 0.435 | b.7.2 | Periplasmic chaperone C-domain |
| View | Download | 0.427 | d.267.1 | Description not found. |
| View | Download | 0.403 | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.398 | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.394 | a.130.1 | Chorismate mutase II |
| View | Download | 0.281 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.269 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.253 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.232 | a.4.5 | "Winged helix" DNA-binding domain |
|
Region A: Residues: [90-783] |
1 11 21 31 41 51
| | | | | |
1 AVPLKDYRNI GIMAHIDAGK TTTTERILYY TGRNYKIGEV HEGTATMDWM EQEQERGITI 60
61 TSAATTTFWD KHRINIIDTP GHVDFTLEVE RALRVLDGAI CLFDSVAGVE PQSETVWRQA 120
121 DKYGVPRICF VNKMDRLGAN FFRTRDMIVT NLGAKPLVLQ IPIGAEDVFK GVVDLVRMKA 180
181 IVWSGEELGA KFSYEDIPED LEDLAQEYRA AMMELIVDLD DEVMENYLEG VEPDEATVKR 240
241 LVRKGTITGK FVPILCGSAF KNKGVQPLLD AVVDYLPSPV EVPPMNGTDP ENPEITIIRK 300
301 PDDDEPFAGL AFKIMSDPFV GSLTFVRVYS GKISAGSYVL NANKGKKERI GRLLEMHANS 360
361 REDVKVALTG DIIALAGLKD TITGETLSDP ENPVVLERMD FPDPVIKVAI EPKTKADIDK 420
421 MATGLIKLAQ EDPSFHFSRD EEMNQTVIEG MGELHLEIIV DRLKREFKVE ANVGAPQVNY 480
481 RESISKIAEV KYTHKKQSGG QGQFADITVR FEPLEAGSGY EFKSEIKGGA VPREYIPGVM 540
541 KGLEECMSTG VLAGFPVVDV RACLVDGSYH DVDSSVLAFQ LAARGAFREG MRKAGPRMLE 600
601 PIMRVEVVTP EEHLGDVIGD LNSRRGQINS FGDKPGGLKV VDSLVPLAEM FQYVSTLRGM 660
661 TKGRASYTMQ LAKFDVVPQH IQNQLSSKDQ EVAA
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| Detection Method: | |
| Confidence: | 1000.0 |
| Match: | 1efgA |
| Description: | Elongation factor G (EF-G), domain II; Elongation factor G (EF-G), N-terminal (G) domain; Elongation factor G (EF-G), domain IV; Elongation factor G (EF-G) |
Matching Structure (courtesy of the PDB): |
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